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The SdsR/RyeB RNA is a non-coding RNA that … The SdsR/RyeB RNA is a non-coding RNA that was identified in a large scale screen of E. coli. The exact 5′ and 3′ ends of this RNA are uncertain. This RNA overlaps the SraC/RyeA RNA on the opposite strand suggesting that the two may act in a concerted manner. It is transcribed by general stress factor σs and is most highly expressed in stationary phase. SdsR/RyeB RNA interacts with Hfq. The homologous sRNA in S. enterica was shown to regulate synthesis of major porin OmpD. A study using Salmonella identified 20 targets of this sRNA including transcriptional regulator, CRP, global DNA-binding factors, StpA and HupB, the antibiotic transporter protein, TolC, and the RtsA/B two-component system (TCS), and validated their post-transcriptional control by SdsR/RyeB RNA.-transcriptional control by SdsR/RyeB RNA.
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http://dbpedia.org/resource/Secondary_structure +
, http://dbpedia.org/resource/RyeE_RNA +
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, http://dbpedia.org/resource/Salmonella_enterica +
, http://dbpedia.org/resource/RydB_RNA +
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http://dbpedia.org/property/caption
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Predicted secondary structure and sequence conservation of SdsR_RyeB
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http://dbpedia.org/property/id
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RF00111
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http://dbpedia.org/property/name
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RyeB RNA
, SdsR/RyeB RNA
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RF00111
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SdsR_RyeB
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rdf:type |
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rdfs:comment |
The SdsR/RyeB RNA is a non-coding RNA that … The SdsR/RyeB RNA is a non-coding RNA that was identified in a large scale screen of E. coli. The exact 5′ and 3′ ends of this RNA are uncertain. This RNA overlaps the SraC/RyeA RNA on the opposite strand suggesting that the two may act in a concerted manner. It is transcribed by general stress factor σs and is most highly expressed in stationary phase. SdsR/RyeB RNA interacts with Hfq.y phase. SdsR/RyeB RNA interacts with Hfq.
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rdfs:label |
RyeB RNA
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